HTLV1 Target gene Detail Information

> TBCEL Gene Search Result

Gene Information

Gene Name	TBCEL
Gene ID	219899
Gene Full Name	tubulin folding cofactor E like
Gene Alias	El; LRRC35
Transcripts	ENSG00000154114
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Cytosol;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q5QJ74
HGNC ID	HGNC:28115
VEGA ID	OTTHUMG00000166061
OMIM ID	610451
String ID	9606.ENSP00000403925
PharmGKB ID	PA162405374

Target gene [TBCEL] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6001400	chr11	287	64	100	451	View
6006693	chr11	7	57		64	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO)	HTLV-1 associated myelopathy	39	Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of TBCEL expression and immune infiltrating cell level correlation result in HTLV1+ samples
TBCEL expression: Low -> High

> Dataset: GSE29312
HeatMap of cell type fractions in all samples	Lollipop of TBCEL expression and immune infiltrating cell level correlation result in HTLV1+ samples
TBCEL expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).