HBV Target gene Detail Information

> TBC1D23 Gene Search Result

Gene Information

Gene Name	TBC1D23
Gene ID	55773
Gene Full Name	TBC1 domain family member 23
Gene Alias	PCH11; NS4ATP1
Transcripts	ENSG00000036054
Virus	HBV
Gene Type	protein coding
HPA Location Info	Golgi apparatus;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q9NUY8
HGNC ID	HGNC:25622
VEGA ID	OTTHUMG00000159067
OMIM ID	617687
String ID	9606.ENSP00000377700
PharmGKB ID	PA142670829

Target gene [TBC1D23] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1002075	chr3	295	40	19	354	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of TBC1D23 expression and immune infiltrating cell level correlation result in HBV+ samples
TBC1D23 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).