HBV Target gene Detail Information

> TBC1D2 Gene Search Result

Gene Information

Gene Name	TBC1D2
Gene ID	55357
Gene Full Name	TBC1 domain family member 2
Gene Alias	PARIS1; PARIS-1; TBC1D2A
Transcripts	ENSG00000095383
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoplasm;Plasma membrane;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9BYX2
HGNC ID	HGNC:18026
VEGA ID	OTTHUMG00000020343
OMIM ID	609871
String ID	9606.ENSP00000481721
PharmGKB ID	PA38280

Target gene [TBC1D2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1007431	chr9	13	4	10	27	View
1009195	chr9	4	4	9	17	View
1009389	chr9	4	4	8	16	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of TBC1D2 expression and immune infiltrating cell level correlation result in HBV+ samples
TBC1D2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).