HBV Target gene Detail Information

> TBC1D1 Gene Search Result

Gene Information

Gene Name	TBC1D1
Gene ID	23216
Gene Full Name	TBC1 domain family member 1
Gene Alias	TBC; TBC1
Transcripts	ENSG00000065882
Virus	HBV
Gene Type	protein coding
HPA Location Info	Nucleoli;
HPA Protein Class Info	Predicted intracellular proteins, Transporters
Gene Function	Oncogene
Uniport_ID	Q86TI0
HGNC ID	HGNC:11578
VEGA ID	OTTHUMG00000150302
OMIM ID	609850
String ID	9606.ENSP00000261439
PharmGKB ID	PA36342

Target gene [TBC1D1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1003064	chr4	116	25	29	170	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of TBC1D1 expression and immune infiltrating cell level correlation result in HBV+ samples
TBC1D1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).