HPV Target gene Detail Information

> TARBP1 Gene Search Result


Gene Information
Gene Name TARBP1
Gene ID 6894
Gene Full Name TAR (HIV-1) RNA binding protein 1
Gene Alias TRM3; TRMT3; TRP185; TRP-185
Transcripts ENSG00000059588
Virus HPV
Gene Type protein coding
HPA Location Info Nuclear speckles;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q13395
HGNC ID HGNC:11568
VEGA ID OTTHUMG00000037947
OMIM ID 605052
String ID 9606.ENSP00000040877
PharmGKB ID PA36333
Target gene [TARBP1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5002715 chr1 8 8 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).