HBV Target gene Detail Information

> TANC2 Gene Search Result


Gene Information
Gene Name TANC2
Gene ID 26115
Gene Full Name tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
Gene Alias rols; ROLSA
Transcripts ENSG00000170921
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q9HCD6
HGNC ID HGNC:30212
VEGA ID OTTHUMG00000179103
OMIM ID 615047
String ID 9606.ENSP00000387593
PharmGKB ID PA142670837
Target gene [TANC2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004739 chr17 66 4 70 View
1017488 chr17 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TANC2 expression and immune infiltrating cell level correlation result in HBV+ samples
TANC2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).