HIV Target gene Detail Information

> TAF1B Gene Search Result

Gene Information

Gene Name	TAF1B
Gene ID	9014
Gene Full Name	TATA-box binding protein associated factor, RNA polymerase I subunit B
Gene Alias	SL1; RAF1B; RAFI63; TAFI63; MGC:9349
Transcripts	ENSG00000115750
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoli;Nucleoplasm;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q53T94
HGNC ID	HGNC:11533
VEGA ID	OTTHUMG00000151673
OMIM ID	604904
String ID	9606.ENSP00000263663
PharmGKB ID	PA36308

Target gene [TAF1B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4012278	chr2		5		5	View
4014066	chr2	2			2	View
4016277	chr2				0	View
4016623	chr2				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of TAF1B expression and immune infiltrating cell level correlation result in HIV+ samples
TAF1B expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of TAF1B expression and immune infiltrating cell level correlation result in HIV+ samples
TAF1B expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).