HBV Target gene Detail Information

> TAF15 Gene Search Result


Gene Information
Gene Name TAF15
Gene ID 8148
Gene Full Name TATA-box binding protein associated factor 15
Gene Alias Npl3; RBP56; TAF2N; TAFII68
Transcripts ENSG00000276833
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Gene Function Oncogene
Uniport_ID Q92804
HGNC ID HGNC:11547
VEGA ID OTTHUMG00000191185
OMIM ID 601574
String ID 9606.ENSP00000474096
PharmGKB ID PA36322
Target gene [TAF15] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1009041 chr17 13 5 18 View
1015996 chr17 2 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of TAF15 expression and immune infiltrating cell level correlation result in HBV+ samples
TAF15 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).