HTLV1 Target gene Detail Information

> SYTL2 Gene Search Result


Gene Information
Gene Name SYTL2
Gene ID 54843
Gene Full Name synaptotagmin like 2
Gene Alias EXO4; SLP2; SLP2A; SGA72M; CHR11SYT; PPP1R151
Transcripts ENSG00000137501
Virus HTLV1
Gene Type protein coding
HPA Location Info Golgi apparatus;Nucleoplasm;Plasma membrane;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Transporters
Uniport_ID Q9HCH5
HGNC ID HGNC:15585
VEGA ID OTTHUMG00000166977
OMIM ID 612880
String ID 9606.ENSP00000318803
PharmGKB ID PA37985
Target gene [SYTL2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004516 chr11 64 11 38 113 View
6009265 chr11 28 10 38 View
6010174 chr11 30 3 33 View
6016507 chr11 11 1 12 View
6017992 chr11 4 1 5 10 View
6018439 chr11 7 1 1 9 View
6020169 chr11 3 4 7 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).