HIV Target gene Detail Information

> SYNJ1 Gene Search Result

Gene Information

Gene Name	SYNJ1
Gene ID	8867
Gene Full Name	synaptojanin 1
Gene Alias	EIEE53; INPP5G; PARK20
Transcripts	ENSG00000159082
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoplasm;Centrosome;
HPA Protein Class Info	Disease related genes, Enzymes, Potential drug targets, Predicted intracellular proteins
Uniport_ID	O43426
HGNC ID	HGNC:11503
VEGA ID	OTTHUMG00000064926
OMIM ID	604297
String ID	9606.ENSP00000409667
PharmGKB ID	PA36285

Target gene [SYNJ1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4013676	chr21	3			3	View
4013677	chr21	3			3	View
4014204	chr21	2			2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of SYNJ1 expression and immune infiltrating cell level correlation result in HIV+ samples
SYNJ1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of SYNJ1 expression and immune infiltrating cell level correlation result in HIV+ samples
SYNJ1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).