HTLV1 Target gene Detail Information

> SYNE3 Gene Search Result

Gene Information

Gene Name	SYNE3
Gene ID	161176
Gene Full Name	spectrin repeat containing nuclear envelope family member 3
Gene Alias	KASH3; NET53; Nesp3; C14orf49; C14orf139; LINC00341; NCRNA00341
Transcripts	ENSG00000176438
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Nuclear membrane;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q6ZMZ3
HGNC ID	HGNC:19861
VEGA ID	OTTHUMG00000171632
OMIM ID	610861
String ID	9606.ENSP00000334308
PharmGKB ID	PA134931380

Target gene [SYNE3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6001656	chr14	321	33	21	375	View
6003740	chr14	24	65	54	143	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).