HPV Target gene Detail Information

> SYNE3 Gene Search Result

Gene Information

Gene Name	SYNE3
Gene ID	161176
Gene Full Name	spectrin repeat containing nuclear envelope family member 3
Gene Alias	KASH3; NET53; Nesp3; C14orf49; C14orf139; LINC00341; NCRNA00341
Transcripts	ENSG00000176438
Virus	HPV
Gene Type	protein coding
HPA Location Info	Nuclear membrane;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q6ZMZ3
HGNC ID	HGNC:19861
VEGA ID	OTTHUMG00000171632
OMIM ID	610861
String ID	9606.ENSP00000334308
PharmGKB ID	PA134931380

Target gene [SYNE3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5402345	chr14	16	160	31	207	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).