HTLV1 Target gene Detail Information

> SYNE2 Gene Search Result

Gene Information

Gene Name	SYNE2
Gene ID	23224
Gene Full Name	spectrin repeat containing nuclear envelope protein 2
Gene Alias	NUA; EDMD5; KASH2; Nesp2; TROPH; NUANCE; SYNE-2; Nesprin-2
Transcripts	ENSG00000054654
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Intermediate filaments;Nuclear membrane;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q8WXH0
HGNC ID	HGNC:17084
VEGA ID	OTTHUMG00000140349
OMIM ID	608442
String ID	9606.ENSP00000350719
PharmGKB ID	PA128394613

Target gene [SYNE2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6026617	chr14	2			2	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).