EBV Target gene Detail Information

> SYNE2 Gene Search Result


Gene Information
Gene Name SYNE2
Gene ID 23224
Gene Full Name spectrin repeat containing nuclear envelope protein 2
Gene Alias NUA; EDMD5; KASH2; Nesp2; TROPH; NUANCE; SYNE-2; Nesprin-2
Transcripts ENSG00000054654
Virus EBV
Gene Type protein coding
HPA Location Info Intermediate filaments;Nuclear membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q8WXH0
HGNC ID HGNC:17084
VEGA ID OTTHUMG00000140349
OMIM ID 608442
String ID 9606.ENSP00000350719
PharmGKB ID PA128394613
Target gene [SYNE2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000157 chr14 87 9 4 100 View
3000310 chr14 29 5 1 35 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).