HPV Target gene Detail Information

> SYNDIG1 Gene Search Result

Gene Information

Gene Name	SYNDIG1
Gene ID	79953
Gene Full Name	synapse differentiation inducing 1
Gene Alias	DSPC2; IFITMD5; TMEM90B; C20orf39
Transcripts	ENSG00000101463
Virus	HPV
Gene Type	protein coding
HPA Location Info	Vesicles;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins, Transporters
Uniport_ID	Q9H7V2
HGNC ID	HGNC:15885
VEGA ID	OTTHUMG00000032104
OMIM ID	614311
String ID	9606.ENSP00000366058
PharmGKB ID	PA25752

Target gene [SYNDIG1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5002022	chr20	10	7		17	View
5200102	chr20	25	2	2	29	View
5403100	chr20	5	12		17	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).