HBV Target gene Detail Information

> SYNDIG1 Gene Search Result


Gene Information
Gene Name SYNDIG1
Gene ID 79953
Gene Full Name synapse differentiation inducing 1
Gene Alias DSPC2; IFITMD5; TMEM90B; C20orf39
Transcripts ENSG00000101463
Virus HBV
Gene Type protein coding
HPA Location Info Vesicles;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins, Transporters
Uniport_ID Q9H7V2
HGNC ID HGNC:15885
VEGA ID OTTHUMG00000032104
OMIM ID 614311
String ID 9606.ENSP00000366058
PharmGKB ID PA25752
Target gene [SYNDIG1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006087 chr20 18 14 12 44 View
1010921 chr20 9 1 10 View
1011219 chr20 10 10 View
1402944 chr20 9 1 10 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).