HPV Target gene Detail Information

> SYN2 Gene Search Result


Gene Information
Gene Name SYN2
Gene ID 6854
Gene Full Name synapsin II
Gene Alias SYNII
Transcripts ENSG00000157152
Virus HPV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
HGNC ID HGNC:11495
VEGA ID OTTHUMG00000155335
OMIM ID 600755
String ID 9606.ENSP00000480050
PharmGKB ID PA36277
Target gene [SYN2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5403204 chr3 3 1 4 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).