HBV Target gene Detail Information

> SYF2 Gene Search Result


Gene Information
Gene Name SYF2
Gene ID 25949
Gene Full Name SYF2 pre-mRNA splicing factor
Gene Alias P29; CBPIN; NTC31; fSAP29
Transcripts ENSG00000117614
Virus HBV
Gene Type protein coding
HPA Location Info Nuclear speckles;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID O95926
HGNC ID HGNC:19824
VEGA ID OTTHUMG00000043610
OMIM ID 607090
String ID 9606.ENSP00000236273
PharmGKB ID PA142670853
Target gene [SYF2] related to virus gene/protein/region
ID PMID Mutation Gene/Protein/Region Description Detail
1 12870011 L526M
P
D
C
View
2 12870011 M550V
P
D
C
View

Target gene [SYF2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1012015 chr1 8 8 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).