HBV Target gene Detail Information

> SV2C Gene Search Result

Gene Information

Gene Name	SV2C
Gene ID	22987
Gene Full Name	synaptic vesicle glycoprotein 2C
Transcripts	ENSG00000122012
Virus	HBV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Vesicles;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins, Transporters
Uniport_ID	Q496J9
HGNC ID	HGNC:30670
VEGA ID	OTTHUMG00000162384
OMIM ID	610291
String ID	9606.ENSP00000423541
PharmGKB ID	PA134888452

Target gene [SV2C] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1002492	chr5	233	26	7	266	View
1012605	chr5	6			6	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of SV2C expression and immune infiltrating cell level correlation result in HBV+ samples
SV2C expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).