HPV Target gene Detail Information

> SUSD1 Gene Search Result


Gene Information
Gene Name SUSD1
Gene ID 64420
Gene Full Name sushi domain containing 1
Transcripts ENSG00000106868
Virus HPV
Gene Type protein coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q6UWL2
HGNC ID HGNC:25413
VEGA ID OTTHUMG00000020499
String ID 9606.ENSP00000363382
PharmGKB ID PA134935587
Target gene [SUSD1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5300515 chr9 0 View
5404640 chr9 32 3 35 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).