HIV Target gene Detail Information

> SUN1 Gene Search Result


Gene Information
Gene Name SUN1
Gene ID 23353
Gene Full Name Sad1 and UNC84 domain containing 1
Gene Alias UNC84A
Transcripts ENSG00000164828
Virus HIV
Gene Type protein coding
HPA Location Info Nuclear membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID O94901
HGNC ID HGNC:18587
VEGA ID OTTHUMG00000151426
OMIM ID 607723
String ID 9606.ENSP00000384015
PharmGKB ID PA165618311
Target gene [SUN1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000848 chr7 219 32 13 264 View
4002327 chr7 67 22 10 99 View
4003095 chr7 68 1 69 View
4005150 chr7 30 4 1 35 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of SUN1 expression and immune infiltrating cell level correlation result in HIV+ samples
SUN1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).