HIV Target gene Detail Information

> SUGP1 Gene Search Result

Gene Information

Gene Name	SUGP1
Gene ID	57794
Gene Full Name	SURP and G-patch domain containing 1
Gene Alias	RBP; SF4; F23858
Transcripts	ENSG00000105705
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q8IWZ8
HGNC ID	HGNC:18643
VEGA ID	OTTHUMG00000182223
OMIM ID	607992
String ID	9606.ENSP00000247001
PharmGKB ID	PA165394338

Target gene [SUGP1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4010122	chr19	9	1		10	View
4010123	chr19	7	3		10	View
4010966	chr19	7	1		8	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of SUGP1 expression and immune infiltrating cell level correlation result in HIV+ samples
SUGP1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).