HIV Target gene Detail Information

> SUCO Gene Search Result

Gene Information

Gene Name	SUCO
Gene ID	51430
Gene Full Name	SUN domain containing ossification factor
Gene Alias	CH1; OPT; SLP1; C1orf9
Transcripts	ENSG00000094975
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoli fibrillar center;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	Q9UBS9
HGNC ID	HGNC:1240
VEGA ID	OTTHUMG00000034839
String ID	9606.ENSP00000356696
PharmGKB ID	PA25621

Target gene [SUCO] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001567	chr1	18	20	112	150	View
4008194	chr1	16			16	View
4008385	chr1	1	14		15	View
4009510	chr1	8	3		11	View
4010814	chr1	4	4		8	View
4014306	chr1	2			2	View
4015016	chr1			1	1	View
4015936	chr1				0	View
4016554	chr1				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of SUCO expression and immune infiltrating cell level correlation result in HIV+ samples
SUCO expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).