HIV Target gene Detail Information

> SUCO Gene Search Result


Gene Information
Gene Name SUCO
Gene ID 51430
Gene Full Name SUN domain containing ossification factor
Gene Alias CH1; OPT; SLP1; C1orf9
Transcripts ENSG00000094975
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoli fibrillar center;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID Q9UBS9
HGNC ID HGNC:1240
VEGA ID OTTHUMG00000034839
String ID 9606.ENSP00000356696
PharmGKB ID PA25621
Target gene [SUCO] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001567 chr1 18 20 112 150 View
4008194 chr1 16 16 View
4008385 chr1 1 14 15 View
4009510 chr1 8 3 11 View
4010814 chr1 4 4 8 View
4014306 chr1 2 2 View
4015016 chr1 1 1 View
4015936 chr1 0 View
4016554 chr1 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).