HBV Target gene Detail Information

> STXBP5 Gene Search Result


Gene Information
Gene Name STXBP5
Gene ID 134957
Gene Full Name syntaxin binding protein 5
Gene Alias LGL3; LLGL3; Nbla04300
Transcripts ENSG00000164506
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q5T5C0
HGNC ID HGNC:19665
VEGA ID OTTHUMG00000015766
OMIM ID 604586
String ID 9606.ENSP00000321826
PharmGKB ID PA134954258
Target gene [STXBP5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003484 chr6 103 27 130 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of STXBP5 expression and immune infiltrating cell level correlation result in HBV+ samples
STXBP5 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).