HBV Target gene Detail Information

> STXBP4 Gene Search Result


Gene Information
Gene Name STXBP4
Gene ID 252983
Gene Full Name syntaxin binding protein 4
Gene Alias Synip
Transcripts ENSG00000166263
Virus HBV
Gene Type protein coding
HPA Location Info Plasma membrane;Cytosol;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q6ZWJ1
HGNC ID HGNC:19694
VEGA ID OTTHUMG00000074043
OMIM ID 610415
String ID 9606.ENSP00000365530
PharmGKB ID PA134962267
Target gene [STXBP4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1012195 chr17 2 5 7 View
1013239 chr17 2 3 5 View
1014652 chr17 3 3 View
1015497 chr17 2 2 View
1017580 chr17 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of STXBP4 expression and immune infiltrating cell level correlation result in HBV+ samples
STXBP4 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).