HBV Target gene Detail Information

> STX3 Gene Search Result


Gene Information
Gene Name STX3
Gene ID 6809
Gene Full Name syntaxin 3
Gene Alias STX3A
Transcripts ENSG00000166900
Virus HBV
Gene Type protein coding
HPA Location Info Vesicles;Nuclear membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q13277
HGNC ID HGNC:11438
VEGA ID OTTHUMG00000167353
OMIM ID 600876
String ID 9606.ENSP00000338562
PharmGKB ID PA36235
Target gene [STX3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1013958 chr11 3 1 4 View
1013959 chr11 3 1 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of STX3 expression and immune infiltrating cell level correlation result in HBV+ samples
STX3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).