HBV Target gene Detail Information

> STK39 Gene Search Result


Gene Information
Gene Name STK39
Gene ID 27347
Gene Full Name serine/threonine kinase 39
Gene Alias DCHT; PASK; SPAK
Transcripts ENSG00000198648
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;Vesicles;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q9UEW8
HGNC ID HGNC:17717
VEGA ID OTTHUMG00000133745
OMIM ID 607648
String ID 9606.ENSP00000348278
Drugbank ID BE0009345
PharmGKB ID PA38243
Target gene [STK39] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003390 chr2 49 61 28 138 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of STK39 expression and immune infiltrating cell level correlation result in HBV+ samples
STK39 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).