HBV Target gene Detail Information

> STAU1 Gene Search Result


Gene Information
Gene Name STAU1
Gene ID 6780
Gene Full Name staufen double-stranded RNA binding protein 1
Gene Alias STAU; PPP1R150
Transcripts ENSG00000124214
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID O95793
HGNC ID HGNC:11370
VEGA ID OTTHUMG00000032691
OMIM ID 601716
String ID 9606.ENSP00000360922
PharmGKB ID PA36188
Target gene [STAU1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004130 chr20 92 92 View
1004132 chr20 92 92 View
1007704 chr20 19 5 1 25 View
1014777 chr20 2 1 3 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of STAU1 expression and immune infiltrating cell level correlation result in HBV+ samples
STAU1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).