Home
Virus
Gene
Disease
Dataset
Download
Help
 
HBV Target gene Detail Information

> STAT1 Gene Search Result


Gene Information
Gene Name STAT1
Gene ID 6772
Gene Full Name signal transducer and activator of transcription 1
Gene Alias CANDF7; IMD31A; IMD31B; IMD31C; ISGF-3; STAT91
Transcripts ENSG00000115415
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins, Transcription factors
Gene Function Suppressor gene
Uniport_ID P42224
HGNC ID HGNC:11362
VEGA ID OTTHUMG00000132699
OMIM ID 600555
String ID 9606.ENSP00000354394
PharmGKB ID PA36183
Target gene [STAT1] related to VISs
DVIDChromosomeHMTFBSCASum of Overlapped RecordsDetail
1006926 chr2 32 32 View
1006927 chr2 32 32 View
1007547 chr2 22 4 26 View
1011265 chr2 9 9 View
1018295 chr2 0 View
1403455 chr2 9 9 View
Showing 1 to 6 of 6 entries
FirstPrevious1NextLast

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of STAT1 expression and immune infiltrating cell level correlation result in HBV+ samples
STAT1 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).