HIV Target gene Detail Information

> STAMBPL1 Gene Search Result


Gene Information
Gene Name STAMBPL1
Gene ID 57559
Gene Full Name STAM binding protein like 1
Gene Alias AMSH-FP; AMSH-LP; ALMalpha; bA399O19.2
Transcripts ENSG00000138134
Virus HIV
Gene Type protein coding
HPA Location Info Plasma membrane;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q96FJ0
HGNC ID HGNC:24105
VEGA ID OTTHUMG00000018702
OMIM ID 612352
String ID 9606.ENSP00000360994
PharmGKB ID PA142670864
Target gene [STAMBPL1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001586 chr10 20 11 118 149 View
4007308 chr10 20 20 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of STAMBPL1 expression and immune infiltrating cell level correlation result in HIV+ samples
STAMBPL1 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of STAMBPL1 expression and immune infiltrating cell level correlation result in HIV+ samples
STAMBPL1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).