HBV Target gene Detail Information

> ST18 Gene Search Result


Gene Information
Gene Name ST18
Gene ID 9705
Gene Full Name ST18, C2H2C-type zinc finger
Gene Alias NZF3; ZNF387; ZC2H2C3; ZC2HC10
Transcripts ENSG00000147488
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID O60284
HGNC ID HGNC:18695
VEGA ID OTTHUMG00000164233
OMIM ID 617155
String ID 9606.ENSP00000276480
PharmGKB ID PA38642
Target gene [ST18] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005212 chr8 29 23 6 58 View
1006877 chr8 29 4 33 View
1010371 chr8 6 6 12 View
1010372 chr8 6 6 12 View
1010373 chr8 6 6 12 View
1011719 chr8 5 3 8 View
1019964 chr8 0 View
1403447 chr8 29 23 6 58 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ST18 expression and immune infiltrating cell level correlation result in HBV+ samples
ST18 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).