HPV Target gene Detail Information

> SSR1 Gene Search Result


Gene Information
Gene Name SSR1
Gene ID 6745
Gene Full Name signal sequence receptor subunit 1
Gene Alias TRAPA
Transcripts ENSG00000124783
Virus HPV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID P43307
HGNC ID HGNC:11323
VEGA ID OTTHUMG00000014202
OMIM ID 600868
String ID 9606.ENSP00000244763
PharmGKB ID PA36147
Target gene [SSR1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5300178 chr6 13 2 15 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).