HIV Target gene Detail Information

> SSH2 Gene Search Result

Gene Information

Gene Name	SSH2
Gene ID	85464
Gene Full Name	slingshot protein phosphatase 2
Gene Alias	SSH-2; SSH-2L
Transcripts	ENSG00000141298
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q76I76
HGNC ID	HGNC:30580
VEGA ID	OTTHUMG00000132752
OMIM ID	606779
String ID	9606.ENSP00000444743
PharmGKB ID	PA134861867

Target gene [SSH2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001114	chr17	45	54	113	212	View
4002291	chr17	54	29	18	101	View
4003233	chr17	64	2		66	View
4004607	chr17	26	8	8	42	View
4005605	chr17	9	3	19	31	View
4006369	chr17	22	3		25	View
4007555	chr17	1	1	17	19	View
4007556	chr17	1	1	17	19	View
4007611	chr17	18			18	View
4008575	chr17	12	2		14	View
4009543	chr17	11			11	View
4009620	chr17		1	10	11	View
4010705	chr17	8			8	View
4011453	chr17	7			7	View
4011713	chr17	6			6	View
4012252	chr17	2	1	2	5	View
4012732	chr17		2	2	4	View
4012733	chr17	1	1	2	4	View
4013350	chr17	1	1	1	3	View
4015174	chr17	1			1	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).