HIV Target gene Detail Information

> SSBP2 Gene Search Result


Gene Information
Gene Name SSBP2
Gene ID 23635
Gene Full Name single stranded DNA binding protein 2
Gene Alias HSPC116; SOSS-B2
Transcripts ENSG00000145687
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Gene Function Suppressor gene
Uniport_ID P81877
HGNC ID HGNC:15831
VEGA ID OTTHUMG00000119039
OMIM ID 607389
String ID 9606.ENSP00000483921
PharmGKB ID PA38046
Target gene [SSBP2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4009586 chr5 5 1 5 11 View
4012326 chr5 4 1 5 View
4015412 chr5 1 1 View
4015690 chr5 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).