HBV Target gene Detail Information

> SRRM4 Gene Search Result

Gene Information

Gene Name	SRRM4
Gene ID	84530
Gene Full Name	serine/arginine repetitive matrix 4
Gene Alias	nSR100; KIAA1853; MU-MB-2.76
Transcripts	ENSG00000139767
Virus	HBV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	A7MD48
HGNC ID	HGNC:29389
VEGA ID	OTTHUMG00000168928
OMIM ID	613103
String ID	9606.ENSP00000267260
PharmGKB ID	PA165513415

Target gene [SRRM4] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1019554	chr12				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of SRRM4 expression and immune infiltrating cell level correlation result in HBV+ samples
SRRM4 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).