HIV Target gene Detail Information

> SPN Gene Search Result


Gene Information
Gene Name SPN
Gene ID 6693
Gene Full Name sialophorin
Gene Alias LSN; CD43; GALGP; GPL115
Transcripts ENSG00000197471
Virus HIV
Gene Type protein coding
HPA Location Info Plasma membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info CD markers, Predicted membrane proteins
Uniport_ID P16150
HGNC ID HGNC:11249
VEGA ID OTTHUMG00000097765
OMIM ID 182160
String ID 9606.ENSP00000353238
PharmGKB ID PA36079
Target gene [SPN] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4004430 chr1 42 2 44 View
4007885 chr1 16 1 17 View
4010623 chr1 8 8 View
4011668 chr1 6 6 View
4013945 chr1 3 3 View
4014150 chr16 2 2 View
4014812 chr16 2 2 View
4015196 chr1 1 1 View
4015197 chr1 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).