HIV Target gene Detail Information

> SPATS2 Gene Search Result


Gene Information
Gene Name SPATS2
Gene ID 65244
Gene Full Name spermatogenesis associated serine rich 2
Gene Alias SCR59; P59SCR; SPATA10; Nbla00526
Transcripts ENSG00000123352
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q86XZ4
HGNC ID HGNC:18650
VEGA ID OTTHUMG00000169419
OMIM ID 611667
String ID 9606.ENSP00000448228
PharmGKB ID PA134871579
Target gene [SPATS2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4002472 chr12 86 3 4 93 View
4002473 chr12 86 3 4 93 View
4002474 chr12 86 3 4 93 View
4002475 chr12 86 3 4 93 View
4005161 chr12 15 10 10 35 View
4007398 chr12 5 14 19 View
4007652 chr12 16 2 18 View
4009732 chr12 5 6 11 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).