HIV Target gene Detail Information

> SPATC1 Gene Search Result


Gene Information
Gene Name SPATC1
Gene ID 375686
Gene Full Name spermatogenesis and centriole associated 1
Gene Alias SPATA15
Transcripts ENSG00000186583
Virus HIV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q76KD6
HGNC ID HGNC:30510
VEGA ID OTTHUMG00000156976
OMIM ID 610874
String ID 9606.ENSP00000366690
PharmGKB ID PA134907641
Target gene [SPATC1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000077 chr8 826 278 154 1258 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).