HPV Target gene Detail Information

> SOX5 Gene Search Result


Gene Information
Gene Name SOX5
Gene ID 6660
Gene Full Name SRY-box 5
Gene Alias L-SOX5; LAMSHF; L-SOX5B; L-SOX5F
Transcripts ENSG00000134532
Virus HPV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins, Transcription factors
Uniport_ID P35711
HGNC ID HGNC:11201
VEGA ID OTTHUMG00000169026
OMIM ID 604975
String ID 9606.ENSP00000398273
PharmGKB ID PA36038
Target gene [SOX5] related to virus gene/protein/region
ID PMID Mutation Gene/Protein/Region Description Detail
1 24099556 G7553T
LCR
G
R
C
View

Target gene [SOX5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5200194 chr12 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).