HTLV1 Target gene Detail Information

> SOX30 Gene Search Result


Gene Information
Gene Name SOX30
Gene ID 11063
Gene Full Name SRY-box 30
Transcripts ENSG00000039600
Virus HTLV1
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID O94993
HGNC ID HGNC:30635
VEGA ID OTTHUMG00000130247
OMIM ID 606698
String ID 9606.ENSP00000265007
PharmGKB ID PA134876614
Target gene [SOX30] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6005815 chr5 69 11 80 View
6019015 chr5 5 3 8 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).