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HPV Target gene Detail Information

> SOX14 Gene Search Result


Gene Information
Gene Name SOX14
Gene ID 8403
Gene Full Name SRY-box 14
Gene Alias SOX28
Transcripts ENSG00000168875
Virus HPV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID O95416
HGNC ID HGNC:11193
VEGA ID OTTHUMG00000159757
OMIM ID 604747
String ID 9606.ENSP00000305343
PharmGKB ID PA36030
Target gene [SOX14] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5002909 chr3 7 7 View
5200966 chr3 22 22 View
5402707 chr3 6 2 8 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE140662 (GEO) Condyloma Acuminatum 8 Condyloma acuminata (HPV+)(5), Skin(3)
GSE55546 (GEO) Oropharyngeal squamous cell carcinoma 16 Oropharyngeal cancers (HPV+)(12), Normal (4)
GSE55544 (GEO) Oropharyngeal squamous cell carcinoma 23 Oropharyngeal cancers HPV Active (11), Oropharyngeal cancers HPV Inactive (4), Oropharyngeal cancers HPV Negative (8)
GSE55542 (GEO) Oropharyngeal squamous cell carcinoma 36 Oropharyngeal cancers HPV Active (12), Oropharyngeal cancers HPV Inactive (8), Oropharyngeal cancers HPV Negative (16)
GSE51993 (GEO) Cervical intraepithelial neoplasia 24 Cervical intraepithelial neoplasia (HPV+)(17), Normal(7)
HNSC (TCGA) Head and Neck squamous cell carcinoma 566 Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: GSE140662

HeatMap of cell type fractions in all samples Lollipop of SOX14 expression and immune infiltrating cell level correlation result in HPV+ samples
SOX14 expression: Low -> High

> Dataset: GSE55546

HeatMap of cell type fractions in all samples Lollipop of SOX14 expression and immune infiltrating cell level correlation result in HPV+ samples
SOX14 expression: Low -> High

> Dataset: GSE55544

HeatMap of cell type fractions in all samples Lollipop of SOX14 expression and immune infiltrating cell level correlation result in HPV+ samples
SOX14 expression: Low -> High

> Dataset: GSE55542

HeatMap of cell type fractions in all samples Lollipop of SOX14 expression and immune infiltrating cell level correlation result in HPV+ samples
SOX14 expression: Low -> High

> Dataset: GSE51993

HeatMap of cell type fractions in all samples Lollipop of SOX14 expression and immune infiltrating cell level correlation result in HPV+ samples
SOX14 expression: Low -> High

> Dataset: HNSC

HeatMap of cell type fractions in all samples Lollipop of SOX14 expression and immune infiltrating cell level correlation result in HPV+ samples
SOX14 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).