HIV Target gene Detail Information

> SNX32 Gene Search Result


Gene Information
Gene Name SNX32
Gene ID 254122
Gene Full Name sorting nexin 32
Gene Alias SNX6B
Transcripts ENSG00000172803
Virus HIV
Gene Type protein coding
HPA Location Info Cell Junctions;Focal adhesion sites;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q86XE0
HGNC ID HGNC:26423
VEGA ID OTTHUMG00000128491
String ID 9606.ENSP00000310620
PharmGKB ID PA162404314
Target gene [SNX32] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4015019 chr11 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of SNX32 expression and immune infiltrating cell level correlation result in HIV+ samples
SNX32 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).