HIV Target gene Detail Information

> SNX27 Gene Search Result

Gene Information

Gene Name	SNX27
Gene ID	81609
Gene Full Name	sorting nexin family member 27
Gene Alias	MRT1; MY014
Transcripts	ENSG00000143376
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoplasm;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins, Transporters
Uniport_ID	Q96L92
HGNC ID	HGNC:20073
VEGA ID	OTTHUMG00000013052
OMIM ID	611541
String ID	9606.ENSP00000357836
PharmGKB ID	PA134969143

Target gene [SNX27] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000122	chr1	763	75	151	989	View
4000788	chr1	123	146	15	284	View
4006854	chr1	3	7	12	22	View
4008451	chr1	5	6	4	15	View
4012558	chr1	4	1		5	View
4016553	chr1				0	View
4100049	chr1	8	5	2	15	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).