HPV Target gene Detail Information

> SNX2 Gene Search Result


Gene Information
Gene Name SNX2
Gene ID 6643
Gene Full Name sorting nexin 2
Gene Alias TRG-9
Transcripts ENSG00000205302
Virus HPV
Gene Type protein coding
HPA Location Info Endosomes;Lysosomes;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID O60749
HGNC ID HGNC:11173
VEGA ID OTTHUMG00000163020
OMIM ID 605929
String ID 9606.ENSP00000368831
PharmGKB ID PA36012
Target gene [SNX2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5201386 chr5 2 2 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).