HBV Target gene Detail Information

> SNX16 Gene Search Result

Gene Information

Gene Name	SNX16
Gene ID	64089
Gene Full Name	sorting nexin 16
Transcripts	ENSG00000104497
Virus	HBV
Gene Type	protein coding
HPA Location Info	Vesicles;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	P57768
HGNC ID	HGNC:14980
VEGA ID	OTTHUMG00000164727
OMIM ID	614903
String ID	9606.ENSP00000379621
PharmGKB ID	PA134972049

Target gene [SNX16] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1000193	chr8	2393	1251	710	4354	View
1000235	chr8	2099	1089	518	3706	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of SNX16 expression and immune infiltrating cell level correlation result in HBV+ samples
SNX16 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).