HIV Target gene Detail Information

> SNTB2 Gene Search Result


Gene Information
Gene Name SNTB2
Gene ID 6645
Gene Full Name syntrophin beta 2
Gene Alias SNT3; SNTL; SNT2B2; EST25263; D16S2531E
Transcripts ENSG00000260873
Virus HIV
Gene Type protein coding
HPA Location Info Golgi apparatus;Plasma membrane;Nucleoplasm;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q13425
HGNC ID HGNC:11169
VEGA ID OTTHUMG00000174907
OMIM ID 600027
String ID 9606.ENSP00000338191
PharmGKB ID PA36009
Target gene [SNTB2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000918 chr16 35 124 90 249 View
4001659 chr16 59 9 75 143 View
4010404 chr16 5 4 9 View
4011989 chr16 5 1 6 View
4013440 chr16 3 3 View
4015172 chr16 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).