HTLV1 Target gene Detail Information

> SNRPC Gene Search Result


Gene Information
Gene Name SNRPC
Gene ID 6631
Gene Full Name small nuclear ribonucleoprotein polypeptide C
Gene Alias U1C; Yhc1
Transcripts ENSG00000124562
Virus HTLV1
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID P09234
HGNC ID HGNC:11157
VEGA ID OTTHUMG00000014555
OMIM ID 603522
String ID 9606.ENSP00000244520
PharmGKB ID PA35998
Target gene [SNRPC] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6005722 chr6 19 10 53 82 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).