HIV Target gene Detail Information

> SNPH Gene Search Result

Gene Information

Gene Name	SNPH
Gene ID	9751
Gene Full Name	syntaphilin
Transcripts	ENSG00000101298
Virus	HIV
Gene Type	protein coding
HPA Location Info	Mitochondria;Cytokinetic bridge;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	O15079
HGNC ID	HGNC:15931
VEGA ID	OTTHUMG00000031662
OMIM ID	604942
String ID	9606.ENSP00000371297
PharmGKB ID	PA38053

Target gene [SNPH] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4012960	chr20	2	2		4	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of SNPH expression and immune infiltrating cell level correlation result in HIV+ samples
SNPH expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).