HPV Target gene Detail Information

> SNCAIP Gene Search Result


Gene Information
Gene Name SNCAIP
Gene ID 9627
Gene Full Name synuclein alpha interacting protein
Gene Alias Sph1; SYPH1
Transcripts ENSG00000064692
Virus HPV
Gene Type protein coding
HPA Location Info Cytoplasmic bodies;Nucleoplasm;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q9Y6H5
HGNC ID HGNC:11139
VEGA ID OTTHUMG00000128915
OMIM ID 603779
String ID 9606.ENSP00000261368
PharmGKB ID PA35987
Target gene [SNCAIP] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5402549 chr5 45 1 46 View
5403211 chr5 17 8 9 34 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).